|
|
reevaluate
|
reevaluate ( self )
sequences changed, possibly including length
|
|
|
histogrammable
|
histogrammable ( self, pos )
|
|
|
evaluate
|
evaluate ( self, pos )
|
Exceptions
|
|
|
NotImplementedError( "evaluate() method must be" " implemented by %s subclass" % self.__class__.__name__ )
|
|
|
|
alignChange
|
alignChange (
self,
left,
right,
)
alignment changed in positions from left to right
|
|
|
histInfinity
|
histInfinity ( self, pos )
convenience function to map arbitrary number to 0-1 range
used as the histogramFunc for some kinds of data
|
|
|
__init__
|
__init__ (
self,
name,
seqs,
)
|
|