reads a ClustalW ALN format file
Imported modules
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from MultAlignViewer.parse import WrongFileTypeError, FormatSyntaxError
from chimera.Sequence import Sequence
import string
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Functions
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parse
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parse
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parse ( fileName )
Exceptions
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FormatSyntaxError( "Line %d is not " "sequence name followed by sequence " " contents and optional ungapped length" % lineNum )
FormatSyntaxError( "Sequence on line %d not in" " initial sequence block" % lineNum )
WrongFileTypeError()
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