HappyDoc Generated Documentation ./SymmetryCopies

. / SymmetryCopies 

Functions   
  add_symmetry_update_handler 
add_symmetry_update_handler ( mol )
  unique 
unique ( s )

Eliminate identical objects from list.

  model_argument 
model_argument ( id_string )
Exceptions   

MidasError, 'Multiple models with id: %s' % id_string
MidasError, 'No model with id: %s' % id_string

  close_center_transforms 
close_center_transforms (
        mol,
        mref,
        tflist,
        rdist,
        )
  update_symmetry_positions 
update_symmetry_positions ( mol )
  set_volume_icosahedral_symmetry 
set_volume_icosahedral_symmetry ()
  create_symmetry_copies 
create_symmetry_copies (
        mol,
        mref,
        tflist,
        cdist,
        rdist,
        )
  default_molecule 
default_molecule ()
Exceptions   

MidasError, 'No molecules are opened'
MidasError, 'Multiple molecules opened, must specify one'

  undo_symmetry_copies_command 
undo_symmetry_copies_command ( cmdname,  args )
Exceptions   

MidasError, 'Model %s does not have symmetry copies' % fields [ 0 ]

  remove_symmetry_copies 
remove_symmetry_copies ( mol )
Exceptions   

MidasError, 'Model %s does not have symmetry copies' % mol.name

  symmetry_xform 
symmetry_xform (
        mol_xform,
        sym_xform,
        ref_xform,
        )
  remove_symmetry_update_handler 
remove_symmetry_update_handler ( mol )
  motion_cb 
motion_cb (
        trigger_name,
        mol,
        trigger_data,
        )
  is_model_deleted 
is_model_deleted ( m )
  contacting_transforms 
contacting_transforms (
        mol,
        mref,
        tflist,
        cdist,
        )
  symmetry_copies_command 
symmetry_copies_command ( cmdname,  args )
Exceptions   

MidasError, msg
MidasError, 'No symmetric molecules in range'
MidasError, 'No opened volume or reference model specified'
MidasError, 'No molecule opened'

  model_symmetries 
model_symmetries ( mref,  mol )
  parse_float 
parse_float (
        key,
        fields,
        default=None,
        )
Exceptions   

MidasError, 'Missing %s value' % key
MidasError, 'Invalid %s value "%s"' %(key, fields [ f + 1 ] )

  molecule_argument 
molecule_argument ( id_string )
Exceptions   

MidasError, 'Model %s is not a molecule' % id_string

Classes   
Python files   

ChimeraExtension.py


This document was automatically generated Wed Jul 9 15:49:17 2008 by HappyDoc version 3.1