HappyDoc Generated Documentation ./AtomDensity

. / AtomDensity 

Functions   
  select_atoms_outside_map 
select_atoms_outside_map ()

Find selected atoms outside map contour surface and select just those. Also report the number of those atoms.

  show_attribute_histogram 
show_attribute_histogram ( molecule,  attribute_name )
  atoms_outside_map 
atoms_outside_map (
        atoms,
        dr,
        contour_level,
        )
  set_atom_volume_values 
set_atom_volume_values (
        molecule,
        volume_data_region,
        attribute_name,
        )
  replace_special_characters 
replace_special_characters ( attribute_name,  repl_char )

Normalize an attribute name. This eliminates punctuation like "." from attribute names so they work correctly in Chimera commands and atom specs.

Classes   
Python files   

ChimeraExtension.py

gui.py


This document was automatically generated Wed Jul 9 15:49:03 2008 by HappyDoc version 3.1