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select_atoms_outside_map
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select_atoms_outside_map ()
Find selected atoms outside map contour surface and select just those.
Also report the number of those atoms.
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show_attribute_histogram
|
show_attribute_histogram ( molecule, attribute_name )
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atoms_outside_map
|
atoms_outside_map (
atoms,
dr,
contour_level,
)
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set_atom_volume_values
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set_atom_volume_values (
molecule,
volume_data_region,
attribute_name,
)
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replace_special_characters
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replace_special_characters ( attribute_name, repl_char )
Normalize an attribute name. This eliminates punctuation like "." from
attribute names so they work correctly in Chimera commands and atom specs.
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